Here, we show that combining a nonlinear dimensionality reduction method, t -statistic Stochastic Neighbor Embedding (t -SNE), with a novel visualization technique provides a graphical mapping …

Graphical abstract: Transcriptomic learning for digital pathology. Hematoxylin & eosin (H&E)-stained histology slides and RNA-Seq data (FPKM-UQ values) for 28 different cancer types and 8725 ...

2023年10月13日 · Graphical Abstract Transcriptomics Visualization (TOmicsVis) implements 40 functions for transcriptomics data analytics and visualization based on 46 R packages, which provide …

2022年12月5日 · Abstract Regulation of pre-mRNA splicing and polyadenylation plays a profound role in neurons by diversifying the proteome and modulating gene expression in response to physiological …

2025年7月25日 · A 50-year multi-tissue proteomic atlas reveals transcriptome-proteome decoupling, proteostasis decline with amyloid accumulation, and asynchronous aging clocks, identifying …

2024年11月4日 · Spatial transcriptomic analysis of multiple tissues in male mice during aging identifies senescence-sensitive spots and immunoglobulin G accumulation as characteristic features of tissue …

2024年8月12日 · This study presents a time-series single-cell transcriptome atlas during callus induction at the early stage. These data enable the identification of two novel transitional cell types acquired …

2021年12月1日 · drug response and drug interaction in Mycobacterium tuberculosis Graphical abstract Highlights d DRonA defines the transcriptome signature for M. tuberculosis (Mtb) viability

2024年12月20日 · Comparative transcriptome and weighted gene co-expression network analysis identify key transcription factors of Rosa chinensis “old blush” after exposure to a gradual drought …

2019年7月26日 · Graphical Abstract Transcriptome analysis by recognizing the relative contribution of RNA synthesis and decay to RNA levels is essential to understand the regulatory mechanisms …